TAP MADS_MIKC in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SRF-TF
K-box

(Domain names are clickable)



List of proteins (39)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0050s0134.1.ppacid=28916964 transcript=Cagra.0050s0134.1 locus=Cagra.0050s0134 ID=Cagra.0050s0134.1.v1.1 annot-version=v1.1
Cagra.0050s0135.1.ppacid=28917006 transcript=Cagra.0050s0135.1 locus=Cagra.0050s0135 ID=Cagra.0050s0135.1.v1.1 annot-version=v1.1
Cagra.0096s0037.1.ppacid=28897011 transcript=Cagra.0096s0037.1 locus=Cagra.0096s0037 ID=Cagra.0096s0037.1.v1.1 annot-version=v1.1
Cagra.0096s0039.1.ppacid=28896967 transcript=Cagra.0096s0039.1 locus=Cagra.0096s0039 ID=Cagra.0096s0039.1.v1.1 annot-version=v1.1
Cagra.0202s0031.1.ppacid=28919045 transcript=Cagra.0202s0031.1 locus=Cagra.0202s0031 ID=Cagra.0202s0031.1.v1.1 annot-version=v1.1
Cagra.0277s0030.1.ppacid=28911261 transcript=Cagra.0277s0030.1 locus=Cagra.0277s0030 ID=Cagra.0277s0030.1.v1.1 annot-version=v1.1
Cagra.0447s0009.1.ppacid=28914498 transcript=Cagra.0447s0009.1 locus=Cagra.0447s0009 ID=Cagra.0447s0009.1.v1.1 annot-version=v1.1
Cagra.0450s0030.1.ppacid=28913173 transcript=Cagra.0450s0030.1 locus=Cagra.0450s0030 ID=Cagra.0450s0030.1.v1.1 annot-version=v1.1
Cagra.0534s0009.1.ppacid=28907666 transcript=Cagra.0534s0009.1 locus=Cagra.0534s0009 ID=Cagra.0534s0009.1.v1.1 annot-version=v1.1
Cagra.0542s0040.1.ppacid=28916817 transcript=Cagra.0542s0040.1 locus=Cagra.0542s0040 ID=Cagra.0542s0040.1.v1.1 annot-version=v1.1
Cagra.0562s0025.1.ppacid=28910774 transcript=Cagra.0562s0025.1 locus=Cagra.0562s0025 ID=Cagra.0562s0025.1.v1.1 annot-version=v1.1
Cagra.0578s0054.1.ppacid=28898780 transcript=Cagra.0578s0054.1 locus=Cagra.0578s0054 ID=Cagra.0578s0054.1.v1.1 annot-version=v1.1
Cagra.0578s0070.1.ppacid=28898734 transcript=Cagra.0578s0070.1 locus=Cagra.0578s0070 ID=Cagra.0578s0070.1.v1.1 annot-version=v1.1
Cagra.0917s0078.1.ppacid=28909340 transcript=Cagra.0917s0078.1 locus=Cagra.0917s0078 ID=Cagra.0917s0078.1.v1.1 annot-version=v1.1
Cagra.0917s0081.1.ppacid=28909313 transcript=Cagra.0917s0081.1 locus=Cagra.0917s0081 ID=Cagra.0917s0081.1.v1.1 annot-version=v1.1
Cagra.1080s0003.1.ppacid=28912270 transcript=Cagra.1080s0003.1 locus=Cagra.1080s0003 ID=Cagra.1080s0003.1.v1.1 annot-version=v1.1
Cagra.1080s0011.1.ppacid=28912256 transcript=Cagra.1080s0011.1 locus=Cagra.1080s0011 ID=Cagra.1080s0011.1.v1.1 annot-version=v1.1
Cagra.1085s0045.1.ppacid=28900583 transcript=Cagra.1085s0045.1 locus=Cagra.1085s0045 ID=Cagra.1085s0045.1.v1.1 annot-version=v1.1
Cagra.1157s0032.1.ppacid=28919333 transcript=Cagra.1157s0032.1 locus=Cagra.1157s0032 ID=Cagra.1157s0032.1.v1.1 annot-version=v1.1
Cagra.1194s0071.1.ppacid=28912782 transcript=Cagra.1194s0071.1 locus=Cagra.1194s0071 ID=Cagra.1194s0071.1.v1.1 annot-version=v1.1
Cagra.1508s0081.1.ppacid=28905842 transcript=Cagra.1508s0081.1 locus=Cagra.1508s0081 ID=Cagra.1508s0081.1.v1.1 annot-version=v1.1
Cagra.1707s0007.1.ppacid=28906758 transcript=Cagra.1707s0007.1 locus=Cagra.1707s0007 ID=Cagra.1707s0007.1.v1.1 annot-version=v1.1
Cagra.21079s0001.1.ppacid=28908477 transcript=Cagra.21079s0001.1 locus=Cagra.21079s0001 ID=Cagra.21079s0001.1.v1.1 annot-version=v1.1
Cagra.2171s0007.1.ppacid=28898642 transcript=Cagra.2171s0007.1 locus=Cagra.2171s0007 ID=Cagra.2171s0007.1.v1.1 annot-version=v1.1
Cagra.2248s0020.1.ppacid=28918004 transcript=Cagra.2248s0020.1 locus=Cagra.2248s0020 ID=Cagra.2248s0020.1.v1.1 annot-version=v1.1
Cagra.2418s0012.1.ppacid=28906102 transcript=Cagra.2418s0012.1 locus=Cagra.2418s0012 ID=Cagra.2418s0012.1.v1.1 annot-version=v1.1
Cagra.2834s0001.1.ppacid=28918532 transcript=Cagra.2834s0001.1 locus=Cagra.2834s0001 ID=Cagra.2834s0001.1.v1.1 annot-version=v1.1
Cagra.3821s0004.1.ppacid=28901927 transcript=Cagra.3821s0004.1 locus=Cagra.3821s0004 ID=Cagra.3821s0004.1.v1.1 annot-version=v1.1
Cagra.4003s0006.1.ppacid=28894829 transcript=Cagra.4003s0006.1 locus=Cagra.4003s0006 ID=Cagra.4003s0006.1.v1.1 annot-version=v1.1
Cagra.4348s0011.1.ppacid=28920209 transcript=Cagra.4348s0011.1 locus=Cagra.4348s0011 ID=Cagra.4348s0011.1.v1.1 annot-version=v1.1
Cagra.4960s0003.1.ppacid=28911190 transcript=Cagra.4960s0003.1 locus=Cagra.4960s0003 ID=Cagra.4960s0003.1.v1.1 annot-version=v1.1
Cagra.5414s0059.1.ppacid=28913642 transcript=Cagra.5414s0059.1 locus=Cagra.5414s0059 ID=Cagra.5414s0059.1.v1.1 annot-version=v1.1
Cagra.5588s0006.1.ppacid=28914607 transcript=Cagra.5588s0006.1 locus=Cagra.5588s0006 ID=Cagra.5588s0006.1.v1.1 annot-version=v1.1
Cagra.6677s0007.1.ppacid=28896513 transcript=Cagra.6677s0007.1 locus=Cagra.6677s0007 ID=Cagra.6677s0007.1.v1.1 annot-version=v1.1
Cagra.6745s0008.1.ppacid=28919836 transcript=Cagra.6745s0008.1 locus=Cagra.6745s0008 ID=Cagra.6745s0008.1.v1.1 annot-version=v1.1
Cagra.6845s0024.1.ppacid=28894043 transcript=Cagra.6845s0024.1 locus=Cagra.6845s0024 ID=Cagra.6845s0024.1.v1.1 annot-version=v1.1
Cagra.7242s0001.1.ppacid=28906861 transcript=Cagra.7242s0001.1 locus=Cagra.7242s0001 ID=Cagra.7242s0001.1.v1.1 annot-version=v1.1
Cagra.8874s0001.1.ppacid=28901463 transcript=Cagra.8874s0001.1 locus=Cagra.8874s0001 ID=Cagra.8874s0001.1.v1.1 annot-version=v1.1
Cagra.9536s0004.1.ppacid=28896605 transcript=Cagra.9536s0004.1 locus=Cagra.9536s0004 ID=Cagra.9536s0004.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum